arjunprasad.net
Arjun Prasad
I'm a biologist working in bacterial genomics, antimicrobial resistance, and outbreak tracking in Washington, DC.
Email:
arjun "at" arjunprasad.net
GitHub
Some links to resources I created or use
AMRFinderPlus web interface
— An experimental serverless web interface for
AMRFinderPlus
selectRowByCol
A little script to do joins on columns of whitespace delimited text files.
fixReadnamesInPosmap
: convert internally generated UIDs to read names for Celera Assembler posmap files when assembly data was from FASTQ files.
prune_newick
: a little perl script using BioPerl to remove taxa from newick formatted trees.
Nilex Morse Tutor
: A morse code tutor.
Useful links
to other resources.
Some recipes
, by popular request.
Publications
See
Google Scholar